CDS
| Accession Number | TCMCG057C25381 |
| gbkey | CDS |
| Protein Id | XP_018490855.1 |
| Location | join(21824492..21824516,21824813..21824943,21825030..21825147,21825224..21825450,21825534..21825636,21825751..21825821,21826114..21826188,21826281..21826424,21826498..21826660,21826871..21827248,21827330..21827563,21827979..21828742,21828835..21828909,21828998..21829110,21829195..21829311,21829404..21829472,21829590..21829650) |
| Gene | LOC108861481 |
| GeneID | 108861481 |
| Organism | Raphanus sativus |
Protein
| Length | 955aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018635353.1 |
| Definition | PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAGCGTGGATATAAGCTGCAGGAGTTCTTGGCACATTCCGGAAATGTGAATTGTCTAAGTATCGGAAAGAAGACATCACGGTTCCTTATAACCGGAGGAGATGATTGTAAGGTCAACCTCTGGTCAATCGGCAAGTCTACCTCTCTCATGAGTCTTTGTGGACATTCAAGCCCTGTTGACTCGGTAGCTTTCAACTCTGAAGAAGCTTTGGTCCTCGCTGGAGCTTCTTCTGGCGTGATTAAGCTGTGGAATCTACAAGAAGCTAAGGTGGTTCGAGCTTTTACTGGACACATATCAAACTGTTCTGCTCTTGAGTTTCATCCGTTTGGCCAGTACCTTGCATCCGGATCAAGTGACACAAATCTAAAGATTTGGGATATCAGAAAGAAAGGATGCATCCAAACATACAAAGGTCACACTCGTGGCATTAGTACTGTCAAATTTACTCCTGATGGGCGTTGGTTAGTGTCTGGTGGACTTGATAACGTTGTAAAGATTTGGGATATAACTGCTGGAAAGCTCCTGCATGAGTTTAAGTTTCATGATGGACCTATCCGTTCCCTAGACTTCCACCCTCTTGAGTTTCTCCTAGCCTCTGGTTCTGCAGACAGGACTGTGAAATTCTGGGACTTAGAAACGTTTGAATTGATTGGATCTACTAGACCAGAGGCTACTGGAGTTCGCCCAATCGCTTTTCATCCAGATGGACGAACCCTTTTCTGTGGATTAGATGACGGCTTGAAGGTTTATTCATGGGAACCAGTGATATGCCGGGATAGTGTTGATATGGGATGGTCAACCCTTGGTGACTTGTGCATCAACGAAAACAAGTTCGTTGGCTGTTCATATTACCGAAATTCTGTTGGGATTTGGGTCTCAGATATATCGAAACTTGAGCCGTATGGAGCTGGATCTGAGGATAAGAAGGAATGCATGGTGAAAAGATTCAGTGCCTTGGAGGACCAGTCGTCTGAGAGAAAGGGGAGTGGCTCAAGGGGGAGTTCATCCCCGGACTATGAGACAAAAGAGATAAAGAACATATACGTTGACTGTGGAAATTTGAAAGCGGGTATTAGGGCGAGCGAGAAGCAGAATGCAACAACATGTTTTGGACAAGCAGAGGACAAGTCTTCCAGAATGCATAGTGTTGTGGATAGTGATAGTGGGGAAGAATCTTCTCATTCAAGAAGGGAATCTATAGCTTCCTCAAAAACTAGTCCGGGAATACTGCTAAGACCAGCTCATGTTAGAAAGACTCTAGCAAAGTTTGAAGAATCAGTGTCTGCTCAATCTGGAACTCGGAAGAAGAGCGCATTGGATGTTGAAGAGGAGACACAAACTCGAAATGCTGAAGACTCAACCATCAAGGGAATTATGTACAAATTTGAAAAAGCTTTATCATCGGAACCACCAACTGATGAAGCGAATCGTATGCTGCATAAGCCACCTCGTGCACAGAGGTCATCATATAACAACTACAATGAGTCAAGACGAGCAATGTCTGTTGATTCTGCGACTTACAGCGATAGCAAAGATGGGTTGGAGTATTCAGGAGACTTACCGACAGGTGGAAACTTATGCAATGAGGATGTAAACAACCAGCACACTGCCACCAAAACTGAAAGAGTTCTTTCACCAGAAAAGCCTGGTGATGAACAGAAAATAAAAGTTGTCTCCGGGAGGACACGCTCATTGGTTGAGAAGTTTGAGAGAGGAGAAAAAATTACTCATACCGAAGCAGAGAATACTAATGCAGTGGAGCAAGATCCGCATAAGACATCAAGACAGGCAGGTGAAACTCCTGTAGTAGCTTCTACACGACGAGCTAGAAGTACTCCAGCTCGAGTGATGCCTATAGTACTCAACCGGGATAGTAACATGAAATCTGATGAGCTTCCTTCAACGCAACCAGCTAGGACTTCTTCAGTTCCAGTGATGCCTATGATACTCAATCAGCCTACCAATGATGAGCCTTCTGTAACATTAACACCATCTAGAACTTCTCCGGCCCGGACATTGCCCTTGACACTGGATCAGACAACAAATGTTGCATATGGTGAGGTTTCTGTTATGTCAAGAAGACCACGCAGGACTTCCTCAGCTCGAGTAAGGCCTATGTTACTCAGTCAGACATCTCATGAGTGTCTTGTAACATCAACACGTTCAGATAGGACTTCTCCAGCCCGTGTAATGCCATCAAAACTCAATCAAACCGATGACATGACATCGGATACATGTCATAGCACGTCCAGGCGCCGAGCTAGCTCATCTCAAATGCTGGCTACACCCACTGAGATTGATCAGGTGGTTGATATGGCTCAGGATGAGGCAAATGTATCACAAACTGATAGTGACATCACTGAGAATCTAATGCAAACTCATGAGGAGTTCTTAAGCACTCTTCAATCTAGATTGACAAAATTACAAATTGTTAGGCATTTTTGGGAACGTAGCGATGTTAAAGGCGCGATAGGGGCTTTGAGAAAGCTGACAGATCAGTCTGTTCAAGCAGATGTGATCAGTATTTTAACAGACAAGATAGAGATTCTCACATTGGATATGTTCTCTCAGTTGGTCCCTGTCCTCACAAGCTTATTGGGTAGCAGGACAGAGAGGCCTGTGAATGTCTCCTTGGACATGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATTCGCTCAACTGTCTCAGCTCCACGGATAGTTGGCGTTGATCTTCATGCGGATGAAAGGATACAAATCTGCCAAGTTTGTTCTGCGGGACTGCACAAGATTCAAAGGATTCTTCCAATTCTCGCTAGAAGAGGCGGTCTAATATCAAGAAAGGCTCAGGAACTAAACCTTGTTCTTCAACAGACATAG |
| Protein: MAKRGYKLQEFLAHSGNVNCLSIGKKTSRFLITGGDDCKVNLWSIGKSTSLMSLCGHSSPVDSVAFNSEEALVLAGASSGVIKLWNLQEAKVVRAFTGHISNCSALEFHPFGQYLASGSSDTNLKIWDIRKKGCIQTYKGHTRGISTVKFTPDGRWLVSGGLDNVVKIWDITAGKLLHEFKFHDGPIRSLDFHPLEFLLASGSADRTVKFWDLETFELIGSTRPEATGVRPIAFHPDGRTLFCGLDDGLKVYSWEPVICRDSVDMGWSTLGDLCINENKFVGCSYYRNSVGIWVSDISKLEPYGAGSEDKKECMVKRFSALEDQSSERKGSGSRGSSSPDYETKEIKNIYVDCGNLKAGIRASEKQNATTCFGQAEDKSSRMHSVVDSDSGEESSHSRRESIASSKTSPGILLRPAHVRKTLAKFEESVSAQSGTRKKSALDVEEETQTRNAEDSTIKGIMYKFEKALSSEPPTDEANRMLHKPPRAQRSSYNNYNESRRAMSVDSATYSDSKDGLEYSGDLPTGGNLCNEDVNNQHTATKTERVLSPEKPGDEQKIKVVSGRTRSLVEKFERGEKITHTEAENTNAVEQDPHKTSRQAGETPVVASTRRARSTPARVMPIVLNRDSNMKSDELPSTQPARTSSVPVMPMILNQPTNDEPSVTLTPSRTSPARTLPLTLDQTTNVAYGEVSVMSRRPRRTSSARVRPMLLSQTSHECLVTSTRSDRTSPARVMPSKLNQTDDMTSDTCHSTSRRRASSSQMLATPTEIDQVVDMAQDEANVSQTDSDITENLMQTHEEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTDKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRIVGVDLHADERIQICQVCSAGLHKIQRILPILARRGGLISRKAQELNLVLQQT |